188.8.131.52. Clean up peptides
- Adjust pH of overnight digestion to ~2 using 10 % acetic acid.
- For each sample, prepare a STAGE tip (Rappsilber et al., 2007) by pushing 20 µl methanol through, followed by 20 µl 0.5 % acetic acid.
- Push 10 µg total peptide mass (based on original 50 µg input) through the STAGE tip.
- Wash each tip with 20 µl 0.5 % acetic acid.
- Elute the peptides from each tip into a clean microfuge tube with 10 µl 80 % acetonitrile, 0.5 % acetic acid.
- Evaporate the solvent from each sample in a vacuum centrifuge.